Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN3O60637 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TSPAN3O60637 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.7■■□□□ 1.06
TSPAN3O60637 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.7■■□□□ 1.06
TSPAN3O60637 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.7■■□□□ 1.06
TSPAN3O60637 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.7■■□□□ 1.06
TSPAN3O60637 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.7■■□□□ 1.06
TSPAN3O60637 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.7■■□□□ 1.06
TSPAN3O60637 AC231657.2-201ENST00000624556 255 ntBASIC21.7■■□□□ 1.06
TSPAN3O60637 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.7■■□□□ 1.06
TSPAN3O60637 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC21.7■■□□□ 1.06
TSPAN3O60637 AL117328.2-201ENST00000624617 1940 ntBASIC21.7■■□□□ 1.06
TSPAN3O60637 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TSPAN3O60637 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
TSPAN3O60637 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
TSPAN3O60637 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.69■■□□□ 1.06
TSPAN3O60637 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.69■■□□□ 1.06
TSPAN3O60637 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.69■■□□□ 1.06
TSPAN3O60637 SLC7A5P1-201ENST00000568957 537 ntBASIC21.69■■□□□ 1.06
TSPAN3O60637 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TSPAN3O60637 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TSPAN3O60637 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.68■■□□□ 1.06
TSPAN3O60637 CNN2P6-201ENST00000439038 900 ntBASIC21.68■■□□□ 1.06
TSPAN3O60637 TERF1P5-201ENST00000477545 1207 ntBASIC21.68■■□□□ 1.06
TSPAN3O60637 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.68■■□□□ 1.06
TSPAN3O60637 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 AC005181.1-201ENST00000604782 1256 ntBASIC21.68■■□□□ 1.06
TSPAN3O60637 AL050303.2-201ENST00000619798 666 ntBASIC21.68■■□□□ 1.06
TSPAN3O60637 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
TSPAN3O60637 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
TSPAN3O60637 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
TSPAN3O60637 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.68■■□□□ 1.06
TSPAN3O60637 EP400NL-214ENST00000641289 2402 ntBASIC21.68■■□□□ 1.06
TSPAN3O60637 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TSPAN3O60637 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TSPAN3O60637 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 C11orf96-202ENST00000528572 1834 ntBASIC21.67■■□□□ 1.06
TSPAN3O60637 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
TSPAN3O60637 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
TSPAN3O60637 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.67■■□□□ 1.06
TSPAN3O60637 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TSPAN3O60637 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.66■■□□□ 1.06
TSPAN3O60637 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN3O60637 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN3O60637 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.66■■□□□ 1.06
TSPAN3O60637 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
TSPAN3O60637 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TSPAN3O60637 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.66■■□□□ 1.06
TSPAN3O60637 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.65■■□□□ 1.06
TSPAN3O60637 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
TSPAN3O60637 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TSPAN3O60637 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.65■■□□□ 1.06
TSPAN3O60637 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms