Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.52■□□□□ 0.56
GMDSO60547 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
GMDSO60547 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
GMDSO60547 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.52■□□□□ 0.55
GMDSO60547 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
GMDSO60547 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.55
GMDSO60547 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
GMDSO60547 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
GMDSO60547 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.51■□□□□ 0.55
GMDSO60547 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 AC099791.1-201ENST00000416440 715 ntBASIC18.51■□□□□ 0.55
GMDSO60547 AP001330.3-201ENST00000520123 633 ntBASIC18.51■□□□□ 0.55
GMDSO60547 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.51■□□□□ 0.55
GMDSO60547 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.51■□□□□ 0.55
GMDSO60547 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 RASA4CP-201ENST00000424092 1398 ntBASIC18.51■□□□□ 0.55
GMDSO60547 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
GMDSO60547 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.51■□□□□ 0.55
GMDSO60547 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
GMDSO60547 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.5■□□□□ 0.55
GMDSO60547 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.5■□□□□ 0.55
GMDSO60547 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 MIR939-201ENST00000401314 82 ntBASIC18.5■□□□□ 0.55
GMDSO60547 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.5■□□□□ 0.55
GMDSO60547 AC091305.1-201ENST00000479476 895 ntBASIC18.5■□□□□ 0.55
GMDSO60547 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.5■□□□□ 0.55
GMDSO60547 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
GMDSO60547 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GMDSO60547 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.49■□□□□ 0.55
GMDSO60547 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.49■□□□□ 0.55
GMDSO60547 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 IGHV3-19-201ENST00000521488 291 ntBASIC18.49■□□□□ 0.55
GMDSO60547 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.49■□□□□ 0.55
GMDSO60547 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
GMDSO60547 AL031432.3-201ENST00000607698 485 ntBASIC18.49■□□□□ 0.55
GMDSO60547 AL136967.2-201ENST00000623968 743 ntBASIC18.49■□□□□ 0.55
GMDSO60547 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GMDSO60547 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
GMDSO60547 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 LINC01006-201ENST00000333319 2292 ntBASIC18.49■□□□□ 0.55
GMDSO60547 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
GMDSO60547 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
GMDSO60547 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.48■□□□□ 0.55
GMDSO60547 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 SUDS3P1-201ENST00000505831 966 ntBASIC18.48■□□□□ 0.55
GMDSO60547 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.48■□□□□ 0.55
GMDSO60547 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.48■□□□□ 0.55
GMDSO60547 AF213884.3-201ENST00000563833 479 ntBASIC18.48■□□□□ 0.55
GMDSO60547 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
GMDSO60547 AC007952.6-201ENST00000573168 2673 ntBASIC18.48■□□□□ 0.55
GMDSO60547 AC003957.1-201ENST00000625108 2673 ntBASIC18.48■□□□□ 0.55
GMDSO60547 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
GMDSO60547 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.48■□□□□ 0.55
GMDSO60547 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
GMDSO60547 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GMDSO60547 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GMDSO60547 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
GMDSO60547 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.47■□□□□ 0.55
GMDSO60547 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.47■□□□□ 0.55
GMDSO60547 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
GMDSO60547 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.47■□□□□ 0.55
GMDSO60547 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
GMDSO60547 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms