Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
EIF3FO00303 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.58■□□□□ 0.89
EIF3FO00303 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EIF3FO00303 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3FO00303 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
EIF3FO00303 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.58■□□□□ 0.89
EIF3FO00303 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
EIF3FO00303 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.58■□□□□ 0.89
EIF3FO00303 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.58■□□□□ 0.89
EIF3FO00303 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.58■□□□□ 0.89
EIF3FO00303 CCDC92B-201ENST00000575506 885 ntBASIC20.58■□□□□ 0.89
EIF3FO00303 AC008175.2-201ENST00000612840 297 ntBASIC20.58■□□□□ 0.89
EIF3FO00303 AL049796.1-201ENST00000565336 1766 ntBASIC20.58■□□□□ 0.89
EIF3FO00303 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3FO00303 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3FO00303 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.58■□□□□ 0.88
EIF3FO00303 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3FO00303 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3FO00303 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
EIF3FO00303 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3FO00303 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3FO00303 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
EIF3FO00303 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3FO00303 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.57■□□□□ 0.88
EIF3FO00303 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3FO00303 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3FO00303 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.57■□□□□ 0.88
EIF3FO00303 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.57■□□□□ 0.88
EIF3FO00303 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
EIF3FO00303 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
EIF3FO00303 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.56■□□□□ 0.88
EIF3FO00303 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.56■□□□□ 0.88
EIF3FO00303 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.56■□□□□ 0.88
EIF3FO00303 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
EIF3FO00303 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 KRT18P14-201ENST00000534205 1250 ntBASIC20.56■□□□□ 0.88
EIF3FO00303 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.56■□□□□ 0.88
EIF3FO00303 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.56■□□□□ 0.88
EIF3FO00303 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
EIF3FO00303 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EIF3FO00303 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.55■□□□□ 0.88
EIF3FO00303 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.55■□□□□ 0.88
EIF3FO00303 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EIF3FO00303 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.55■□□□□ 0.88
EIF3FO00303 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.55■□□□□ 0.88
EIF3FO00303 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
EIF3FO00303 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
EIF3FO00303 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 AP004607.4-201ENST00000530158 1459 ntBASIC20.55■□□□□ 0.88
EIF3FO00303 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
EIF3FO00303 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
EIF3FO00303 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
EIF3FO00303 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
EIF3FO00303 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3FO00303 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.54■□□□□ 0.88
EIF3FO00303 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3FO00303 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
EIF3FO00303 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.54■□□□□ 0.88
EIF3FO00303 AC010141.2-201ENST00000452426 721 ntBASIC20.54■□□□□ 0.88
EIF3FO00303 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.54■□□□□ 0.88
EIF3FO00303 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.54■□□□□ 0.88
EIF3FO00303 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
EIF3FO00303 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3FO00303 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
EIF3FO00303 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
EIF3FO00303 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
EIF3FO00303 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L2-201ENST00000561772 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L6-201ENST00000626483 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L1-201ENST00000627662 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L8-201ENST00000629013 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L3-201ENST00000630187 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L7-201ENST00000630678 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DUX4L5-201ENST00000630834 1275 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
EIF3FO00303 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.53■□□□□ 0.88
EIF3FO00303 KRT16P2-201ENST00000414673 1423 ntBASIC20.53■□□□□ 0.88
EIF3FO00303 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
EIF3FO00303 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms