Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.75■□□□□ 0.43
SIRPB1O00241 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SIRPB1O00241 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SIRPB1O00241 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.74■□□□□ 0.43
SIRPB1O00241 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SIRPB1O00241 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.74■□□□□ 0.43
SIRPB1O00241 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.74■□□□□ 0.43
SIRPB1O00241 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 AC055733.4-201ENST00000638462 1354 ntBASIC17.74■□□□□ 0.43
SIRPB1O00241 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SIRPB1O00241 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
SIRPB1O00241 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
SIRPB1O00241 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.74■□□□□ 0.43
SIRPB1O00241 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.74■□□□□ 0.43
SIRPB1O00241 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.73■□□□□ 0.43
SIRPB1O00241 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SIRPB1O00241 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.73■□□□□ 0.43
SIRPB1O00241 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
SIRPB1O00241 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.73■□□□□ 0.43
SIRPB1O00241 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 AC012414.1-201ENST00000556676 535 ntBASIC17.73■□□□□ 0.43
SIRPB1O00241 AC005837.3-201ENST00000612163 286 ntBASIC17.73■□□□□ 0.43
SIRPB1O00241 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.73■□□□□ 0.43
SIRPB1O00241 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.73■□□□□ 0.43
SIRPB1O00241 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
SIRPB1O00241 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
SIRPB1O00241 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.73■□□□□ 0.43
SIRPB1O00241 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.73■□□□□ 0.43
SIRPB1O00241 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
SIRPB1O00241 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
SIRPB1O00241 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SIRPB1O00241 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SIRPB1O00241 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.72■□□□□ 0.43
SIRPB1O00241 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.72■□□□□ 0.43
SIRPB1O00241 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.72■□□□□ 0.43
SIRPB1O00241 MIR6084-201ENST00000622012 110 ntBASIC17.72■□□□□ 0.43
SIRPB1O00241 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
SIRPB1O00241 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SIRPB1O00241 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
SIRPB1O00241 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.71■□□□□ 0.43
SIRPB1O00241 FXN-202ENST00000396364 980 ntTSL 5 BASIC17.71■□□□□ 0.43
SIRPB1O00241 AC105265.2-201ENST00000467189 838 ntBASIC17.71■□□□□ 0.43
SIRPB1O00241 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.71■□□□□ 0.43
SIRPB1O00241 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
SIRPB1O00241 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SIRPB1O00241 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.71■□□□□ 0.43
SIRPB1O00241 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.71■□□□□ 0.43
SIRPB1O00241 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
SIRPB1O00241 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
SIRPB1O00241 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SIRPB1O00241 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.7■□□□□ 0.42
SIRPB1O00241 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
SIRPB1O00241 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms