Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 AC105233.4-201ENST00000642045 216 ntBASIC16.8■□□□□ 0.28
CGB1A6NKQ9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.8■□□□□ 0.28
CGB1A6NKQ9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 AL355001.2-201ENST00000620617 1191 ntBASIC16.79■□□□□ 0.28
CGB1A6NKQ9 AL136967.2-201ENST00000623968 743 ntBASIC16.79■□□□□ 0.28
CGB1A6NKQ9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CGB1A6NKQ9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 RASA4CP-201ENST00000424092 1398 ntBASIC16.78■□□□□ 0.28
CGB1A6NKQ9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 AL049796.1-201ENST00000565336 1766 ntBASIC16.78■□□□□ 0.28
CGB1A6NKQ9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 AC009237.3-201ENST00000393279 1427 ntBASIC16.78■□□□□ 0.28
CGB1A6NKQ9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
CGB1A6NKQ9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 MIR572-201ENST00000384983 95 ntBASIC16.77■□□□□ 0.28
CGB1A6NKQ9 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.77■□□□□ 0.28
CGB1A6NKQ9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC16.77■□□□□ 0.27
CGB1A6NKQ9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 AC005224.4-201ENST00000583262 1652 ntBASIC16.76■□□□□ 0.27
CGB1A6NKQ9 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 AC091305.1-201ENST00000479476 895 ntBASIC16.76■□□□□ 0.27
CGB1A6NKQ9 SUDS3P1-201ENST00000505831 966 ntBASIC16.76■□□□□ 0.27
CGB1A6NKQ9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CGB1A6NKQ9 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CGB1A6NKQ9 BX005040.4-201ENST00000637145 1518 ntBASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms