Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.58■□□□□ 0.56
MBD3L3A6NE82 AC068473.5-201ENST00000616428 2072 ntBASIC18.58■□□□□ 0.56
MBD3L3A6NE82 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.57■□□□□ 0.56
MBD3L3A6NE82 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L3A6NE82 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 AC091799.1-201ENST00000422823 811 ntBASIC18.56■□□□□ 0.56
MBD3L3A6NE82 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 AC010980.2-201ENST00000587099 1412 ntBASIC18.56■□□□□ 0.56
MBD3L3A6NE82 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L3A6NE82 C11orf96-202ENST00000528572 1834 ntBASIC18.56■□□□□ 0.56
MBD3L3A6NE82 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 BX276092.2-201ENST00000417668 665 ntBASIC18.55■□□□□ 0.56
MBD3L3A6NE82 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L3A6NE82 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 FAM21FP-204ENST00000608637 956 ntBASIC18.54■□□□□ 0.56
MBD3L3A6NE82 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MBD3L3A6NE82 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L3A6NE82 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 CDV3P1-201ENST00000471403 739 ntBASIC18.52■□□□□ 0.56
MBD3L3A6NE82 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MBD3L3A6NE82 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MBD3L3A6NE82 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms