Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 AC068473.5-201ENST00000616428 2072 ntBASIC18.58■□□□□ 0.56
MBD3L4A6NDZ8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MBD3L4A6NDZ8 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 AC091799.1-201ENST00000422823 811 ntBASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 AC010980.2-201ENST00000587099 1412 ntBASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 C11orf96-202ENST00000528572 1834 ntBASIC18.56■□□□□ 0.56
MBD3L4A6NDZ8 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 BX276092.2-201ENST00000417668 665 ntBASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
MBD3L4A6NDZ8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 FAM21FP-204ENST00000608637 956 ntBASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
MBD3L4A6NDZ8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MBD3L4A6NDZ8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 CDV3P1-201ENST00000471403 739 ntBASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
MBD3L4A6NDZ8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MBD3L4A6NDZ8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms