Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 AC092118.2-201ENST00000613495 667 ntBASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TBC1D3BA6NDS4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 RNA5SP413-201ENST00000516373 109 ntBASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TBC1D3BA6NDS4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TBC1D3BA6NDS4 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TBC1D3BA6NDS4 AC026471.6-201ENST00000622954 1905 ntBASIC21.39■■□□□ 1.02
TBC1D3BA6NDS4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.39■■□□□ 1.02
TBC1D3BA6NDS4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 RARRES2P4-201ENST00000514074 484 ntBASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
TBC1D3BA6NDS4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 AC010980.2-201ENST00000587099 1412 ntBASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TBC1D3BA6NDS4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
TBC1D3BA6NDS4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
TBC1D3BA6NDS4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.37■■□□□ 1.01
TBC1D3BA6NDS4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TBC1D3BA6NDS4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 AC010542.4-201ENST00000563151 1910 ntBASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 AC097658.1-201ENST00000475555 843 ntBASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TBC1D3BA6NDS4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
TBC1D3BA6NDS4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TBC1D3BA6NDS4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms