Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 AC092028.1-203ENST00000608262 953 ntBASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
MEIS3P1A6NDR6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 AP005212.1-201ENST00000581547 1997 ntBASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.97■□□□□ 0.47
MEIS3P1A6NDR6 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 AC012354.3-201ENST00000623734 483 ntBASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 GABARAPL3-202ENST00000624044 1851 ntBASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 AC133637.1-201ENST00000624115 1537 ntBASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
MEIS3P1A6NDR6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
MEIS3P1A6NDR6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
MEIS3P1A6NDR6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.94■□□□□ 0.46
MEIS3P1A6NDR6 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms