Protein–RNA interactions for Protein: A0A0K0K1A5

TRBV6-5, T-cell receptor beta variable 6-5 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-5A0A0K0K1A5 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-5A0A0K0K1A5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TRBV6-5A0A0K0K1A5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AK3-203ENST00000447596 705 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC121338.2-201ENST00000622535 1744 ntBASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRBV6-5A0A0K0K1A5 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AP005435.1-201ENST00000529293 1178 ntBASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC010525.1-201ENST00000585559 441 ntBASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC020907.5-201ENST00000624372 1936 ntBASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 UNC93B8-201ENST00000511903 705 ntBASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.86□□□□□ -0.03
TRBV6-5A0A0K0K1A5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC027702.1-201ENST00000563810 1770 ntBASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRBV6-5A0A0K0K1A5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms