Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 SLC47A1P1-202ENST00000449666 945 ntBASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TRAV21A0A0B4J279 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV21A0A0B4J279 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TRAV21A0A0B4J279 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV21A0A0B4J279 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TRAV21A0A0B4J279 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV21A0A0B4J279 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 SLC25A24-204ENST00000569674 2357 ntBASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TRAV21A0A0B4J279 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
TRAV21A0A0B4J279 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 AL356441.2-201ENST00000443009 864 ntBASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
TRAV21A0A0B4J279 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms