Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
TRAV4A0A0B4J268 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 MIR572-201ENST00000384983 95 ntBASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC15.12■□□□□ 0.01
TRAV4A0A0B4J268 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 EBPL-204ENST00000378272 766 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 AL139246.5-201ENST00000606645 996 ntBASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV4A0A0B4J268 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 FXN-202ENST00000396364 980 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV4A0A0B4J268 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 BX005040.4-201ENST00000637145 1518 ntBASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 AL136967.2-201ENST00000623968 743 ntBASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV4A0A0B4J268 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV4A0A0B4J268 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV4A0A0B4J268 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV4A0A0B4J268 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV4A0A0B4J268 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms