Protein–RNA interactions for Protein: A0A0B4J240

TRAV10, T-cell receptor alpha variable 10 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV10A0A0B4J240 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 CYP2T1P-201ENST00000432607 1285 ntBASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 AC142086.2-201ENST00000569753 217 ntBASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV10A0A0B4J240 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV10A0A0B4J240 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 RGMA-211ENST00000557420 989 ntTSL 3 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 OR10C1-204ENST00000622521 1039 ntBASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV10A0A0B4J240 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 AC068473.5-201ENST00000616428 2072 ntBASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 AC068338.2-201ENST00000563278 1430 ntBASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV10A0A0B4J240 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 AC003102.1-202ENST00000563394 1796 ntBASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 AC133041.1-202ENST00000642053 222 ntBASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV10A0A0B4J240 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV10A0A0B4J240 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV10A0A0B4J240 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
TRAV10A0A0B4J240 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
TRAV10A0A0B4J240 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms