Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV9-1A0A075B6T8 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 GAK-223ENST00000628912 497 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV9-1A0A075B6T8 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 AC116562.4-201ENST00000641316 2276 ntBASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV9-1A0A075B6T8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV9-1A0A075B6T8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 PLK5-205ENST00000642079 1969 ntBASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV9-1A0A075B6T8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 AP000974.1-201ENST00000623909 2387 ntBASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV9-1A0A075B6T8 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV9-1A0A075B6T8 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC15.77■□□□□ 0.11
TRAV9-1A0A075B6T8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV9-1A0A075B6T8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV9-1A0A075B6T8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV9-1A0A075B6T8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV9-1A0A075B6T8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms