Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AL356273.3-201ENST00000623474 1989 ntBASIC9.86□□□□□ -0.83
P04436 NT5C1B-RDH14-202ENST00000532967 2142 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
P04436 RPRD2-202ENST00000369068 4612 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 BCAS3-201ENST00000390652 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 ST6GALNAC1-201ENST00000156626 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 NUP188-201ENST00000372577 5689 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 PGK1-201ENST00000373316 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 PCDHGA11-203ENST00000622044 3633 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
P04436 LINC02170-202ENST00000562231 2218 ntTSL 2 BASIC9.86□□□□□ -0.83
P04436 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 ANAPC16-205ENST00000621663 3567 ntAPPRIS P1 TSL 3 BASIC9.86□□□□□ -0.83
P04436 FANCA-230ENST00000568369 4601 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
P04436 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 H2AFY-201ENST00000304332 1881 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 OR52I2-201ENST00000312614 1115 ntAPPRIS P2 BASIC9.86□□□□□ -0.83
P04436 TNNT2-205ENST00000367318 1122 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
P04436 MT1G-201ENST00000379811 405 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 FAM239A-201ENST00000381108 2198 ntTSL 2 BASIC9.86□□□□□ -0.83
P04436 MBP-210ENST00000397869 884 ntTSL 4 BASIC9.86□□□□□ -0.83
P04436 RPL3P7-201ENST00000417878 1212 ntBASIC9.86□□□□□ -0.83
P04436 AC004951.2-201ENST00000420754 789 ntBASIC9.86□□□□□ -0.83
P04436 RPL13AP6-201ENST00000430133 612 ntBASIC9.86□□□□□ -0.83
P04436 FABP5P11-201ENST00000430910 397 ntBASIC9.86□□□□□ -0.83
P04436 HLA-DRB6-203ENST00000437650 715 ntBASIC9.86□□□□□ -0.83
P04436 MRPL2-203ENST00000468957 689 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 TTC9C-205ENST00000532583 858 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 AL137230.1-203ENST00000555560 698 ntTSL 5 BASIC9.86□□□□□ -0.83
P04436 LINC00523-205ENST00000556308 574 ntTSL 4 BASIC9.86□□□□□ -0.83
P04436 LINC00239-201ENST00000556973 639 ntTSL 3 BASIC9.86□□□□□ -0.83
P04436 AL023803.1-201ENST00000570096 187 ntBASIC9.86□□□□□ -0.83
P04436 STRADA-211ENST00000579340 1168 ntTSL 5 BASIC9.86□□□□□ -0.83
P04436 RN7SL377P-201ENST00000585039 278 ntBASIC9.86□□□□□ -0.83
P04436 ZNF561-AS1-206ENST00000591056 551 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 Z69706.1-201ENST00000595428 547 ntBASIC9.86□□□□□ -0.83
P04436 DPCD-206ENST00000626968 541 ntTSL 5 BASIC9.86□□□□□ -0.83
P04436 OR52I2-202ENST00000641486 1115 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
P04436 CORO2B-202ENST00000540068 3332 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
P04436 ZBTB24-201ENST00000230122 5519 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 ZNF619-204ENST00000447116 4153 ntAPPRIS P4 TSL 5 BASIC9.86□□□□□ -0.83
P04436 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 TCF4-206ENST00000537856 1996 ntTSL 2 BASIC9.86□□□□□ -0.83
P04436 PEX5L-205ENST00000464614 1817 ntAPPRIS ALT2 TSL 2 BASIC9.86□□□□□ -0.83
P04436 TNXB-203ENST00000451343 3125 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 SEMA4D-201ENST00000339861 4258 ntTSL 5 BASIC9.86□□□□□ -0.83
P04436 HNRNPC-230ENST00000557201 1371 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 FKBP4P2-201ENST00000598909 1371 ntBASIC9.86□□□□□ -0.83
P04436 ACSBG2-210ENST00000591403 2690 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 PPP1R3C-201ENST00000238994 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
P04436 LCORL-207ENST00000635767 10430 ntTSL 5 BASIC9.86□□□□□ -0.83
P04436 DUOX1-211ENST00000561166 4539 ntTSL 2 BASIC9.86□□□□□ -0.83
P04436 SLC1A7-205ENST00000620288 3378 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 KIAA1644-201ENST00000381176 6751 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
P04436 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
P04436 RGMA-201ENST00000329082 11350 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 TTC30B-201ENST00000408939 4017 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
P04436 LRP1-202ENST00000338962 2169 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 GGPS1-201ENST00000282841 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 FUT8-204ENST00000394586 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 C3orf67-206ENST00000472469 4108 ntTSL 2 BASIC9.85□□□□□ -0.83
P04436 CSPG4P10-202ENST00000612093 3411 ntTSL 2 BASIC9.85□□□□□ -0.83
P04436 ZNF529-201ENST00000334116 5238 ntTSL 2 BASIC9.85□□□□□ -0.83
P04436 ARF1-201ENST00000272102 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 LINC01600-201ENST00000624527 2434 ntTSL 2 BASIC9.85□□□□□ -0.83
P04436 WDR31-201ENST00000341761 4862 ntAPPRIS P3 TSL 5 BASIC9.85□□□□□ -0.83
P04436 WDR31-202ENST00000374193 4878 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 SFXN2-201ENST00000369893 6866 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 IVD-203ENST00000479013 4251 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 WDR83OS-201ENST00000222190 599 ntAPPRIS ALT1 TSL 2 BASIC9.85□□□□□ -0.83
P04436 METTL1-201ENST00000257848 1096 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 AL022313.1-201ENST00000339367 444 ntBASIC9.85□□□□□ -0.83
P04436 USMG5-204ENST00000369815 626 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
P04436 HLA-DQA1-202ENST00000374949 1060 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
P04436 KRTAP9-2-201ENST00000377721 1005 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
P04436 AP001888.1-201ENST00000413963 720 ntBASIC9.85□□□□□ -0.83
P04436 FAHD2CP-201ENST00000427863 900 ntBASIC9.85□□□□□ -0.83
P04436 RBM22P3-201ENST00000430648 954 ntBASIC9.85□□□□□ -0.83
P04436 RPLP1P13-201ENST00000434567 299 ntBASIC9.85□□□□□ -0.83
P04436 HNRNPA1P22-201ENST00000437295 946 ntBASIC9.85□□□□□ -0.83
P04436 LINC00323-203ENST00000446910 580 ntTSL 3 BASIC9.85□□□□□ -0.83
P04436 AC105118.1-201ENST00000523002 544 ntTSL 3 BASIC9.85□□□□□ -0.83
P04436 WASH3P-206ENST00000559884 427 ntTSL 5 BASIC9.85□□□□□ -0.83
P04436 AC068987.3-202ENST00000567167 1027 ntTSL 5 BASIC9.85□□□□□ -0.83
P04436 FAM192A-220ENST00000569266 981 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 AC123768.3-203ENST00000576873 969 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 RN7SL122P-201ENST00000579362 301 ntBASIC9.85□□□□□ -0.83
P04436 AC090912.2-204ENST00000583086 571 ntTSL 4 BASIC9.85□□□□□ -0.83
P04436 AC004149.1-201ENST00000593169 549 ntTSL 4 BASIC9.85□□□□□ -0.83
P04436 AC008760.1-201ENST00000594056 686 ntTSL 3 BASIC9.85□□□□□ -0.83
P04436 AC011467.5-201ENST00000597392 996 ntBASIC9.85□□□□□ -0.83
P04436 AC016885.3-201ENST00000598428 258 ntBASIC9.85□□□□□ -0.83
P04436 AL138966.1-201ENST00000603212 313 ntBASIC9.85□□□□□ -0.83
P04436 RNF215-208ENST00000619645 555 ntBASIC9.85□□□□□ -0.83
P04436 ATP8B5P-201ENST00000329395 2869 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
P04436 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms