Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 DUX4L16-201ENST00000555130 1264 ntBASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 MYCNOS-205ENST00000641950 531 ntBASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TNFRSF11AQ9Y6Q6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC25.97■■□□□ 1.75
TNFRSF11AQ9Y6Q6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 BID-214ENST00000617586 542 ntTSL 5 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
TNFRSF11AQ9Y6Q6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TNFRSF11AQ9Y6Q6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC25.95■■□□□ 1.75
TNFRSF11AQ9Y6Q6 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.95■■□□□ 1.74
TNFRSF11AQ9Y6Q6 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CNN2P6-201ENST00000439038 900 ntBASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CROCCP5-201ENST00000436658 830 ntBASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.93■■□□□ 1.74
TNFRSF11AQ9Y6Q6 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 GAS2L1P2-201ENST00000436355 1356 ntBASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
TNFRSF11AQ9Y6Q6 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 MAZ-216ENST00000616501 991 ntTSL 5 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TNFRSF11AQ9Y6Q6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 WWC2-AS2-201ENST00000578387 2183 ntBASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
TNFRSF11AQ9Y6Q6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms