Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 AC011298.3-201ENST00000615796 283 ntBASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
AP4B1Q9Y6B7 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 MIR3181-201ENST00000578512 73 ntBASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
AP4B1Q9Y6B7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 AC024257.2-201ENST00000549699 147 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 pRNA.6-201ENST00000610482 90 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 pRNA.5-201ENST00000612139 90 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 pRNA.11-201ENST00000618423 90 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 pRNA.13-201ENST00000619112 90 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
AP4B1Q9Y6B7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
AP4B1Q9Y6B7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 AL499627.2-201ENST00000606283 725 ntBASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
AP4B1Q9Y6B7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 MIR638-201ENST00000385237 100 ntBASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 AC136469.2-201ENST00000623944 1028 ntBASIC20.08■□□□□ 0.81
AP4B1Q9Y6B7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
AP4B1Q9Y6B7 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms