Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RPH3AQ9Y2J0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 AC010542.4-201ENST00000563151 1910 ntBASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 AC104187.1-201ENST00000607510 612 ntBASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPH3AQ9Y2J0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 AC003102.1-202ENST00000563394 1796 ntBASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.27■□□□□ 0.68
RPH3AQ9Y2J0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.27■□□□□ 0.67
RPH3AQ9Y2J0 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
RPH3AQ9Y2J0 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
RPH3AQ9Y2J0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 KRT19P1-201ENST00000405746 1186 ntBASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
RPH3AQ9Y2J0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 AC137761.2-201ENST00000561729 223 ntBASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 AC145350.3-201ENST00000569033 163 ntBASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPH3AQ9Y2J0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPH3AQ9Y2J0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms