Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
VPS9D1Q9Y2B5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 AC027612.3-201ENST00000413684 1047 ntBASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
VPS9D1Q9Y2B5 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
VPS9D1Q9Y2B5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 AC053503.5-201ENST00000601508 636 ntBASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.92■□□□□ 0.94
VPS9D1Q9Y2B5 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 MIR6084-201ENST00000622012 110 ntBASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 AL137060.1-201ENST00000618151 2648 ntBASIC20.91■□□□□ 0.94
VPS9D1Q9Y2B5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 AL024507.2-201ENST00000606070 2574 ntBASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 EEF1DP3-203ENST00000566025 782 ntBASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
VPS9D1Q9Y2B5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
VPS9D1Q9Y2B5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
VPS9D1Q9Y2B5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
VPS9D1Q9Y2B5 LINC02228-203ENST00000641970 1355 ntBASIC20.89■□□□□ 0.93
VPS9D1Q9Y2B5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS9D1Q9Y2B5 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS9D1Q9Y2B5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS9D1Q9Y2B5 AC079140.4-201ENST00000507448 529 ntBASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms