Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CNOT11Q9UKZ1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CNOT11Q9UKZ1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.18■□□□□ 0.82
CNOT11Q9UKZ1 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CNOT11Q9UKZ1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 IGHV3-19-201ENST00000521488 291 ntBASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 AP005435.1-201ENST00000529293 1178 ntBASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CNOT11Q9UKZ1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CNOT11Q9UKZ1 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CNOT11Q9UKZ1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CNOT11Q9UKZ1 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CNOT11Q9UKZ1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.14■□□□□ 0.81
CNOT11Q9UKZ1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
CNOT11Q9UKZ1 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms