Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NIPSNAP3AQ9UFN0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NIPSNAP3AQ9UFN0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NIPSNAP3AQ9UFN0 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 AL035685.1-201ENST00000636663 812 ntBASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NIPSNAP3AQ9UFN0 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 LINC01006-201ENST00000333319 2292 ntBASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NIPSNAP3AQ9UFN0 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 GUSBP5-201ENST00000418136 578 ntBASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NIPSNAP3AQ9UFN0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NIPSNAP3AQ9UFN0 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 SYT6-210ENST00000641643 1587 ntBASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 AL512631.2-201ENST00000604634 923 ntBASIC20.01■□□□□ 0.79
NIPSNAP3AQ9UFN0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms