Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC005703.6-201ENST00000623265 1329 ntBASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
COMMD3Q9UBI1 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
COMMD3Q9UBI1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.49■□□□□ 0.55
COMMD3Q9UBI1 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 AC006128.1-201ENST00000624704 1661 ntBASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 AC138932.1-201ENST00000534164 6830 ntBASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
COMMD3Q9UBI1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 AC079089.2-201ENST00000531211 1277 ntBASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 U85056.1-201ENST00000616429 682 ntBASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
COMMD3Q9UBI1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.46■□□□□ 0.55
COMMD3Q9UBI1 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms