Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CUEDC1Q9NWM3 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CUEDC1Q9NWM3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CUEDC1Q9NWM3 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CUEDC1Q9NWM3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.39■□□□□ 0.86
CUEDC1Q9NWM3 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.39■□□□□ 0.86
CUEDC1Q9NWM3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CUEDC1Q9NWM3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 AP004607.4-201ENST00000530158 1459 ntBASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 EEF1DP3-203ENST00000566025 782 ntBASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 AC244015.2-201ENST00000616358 1861 ntBASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CUEDC1Q9NWM3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CUEDC1Q9NWM3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 NTF6G-201ENST00000591094 616 ntBASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 AC104187.1-201ENST00000607510 612 ntBASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CUEDC1Q9NWM3 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.35■□□□□ 0.85
CUEDC1Q9NWM3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 HLA-L-209ENST00000420110 1011 ntBASIC20.34■□□□□ 0.85
CUEDC1Q9NWM3 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms