Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCM2LQ9NUG4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.01■□□□□ 0.79
CCM2LQ9NUG4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CCM2LQ9NUG4 GABARAPL3-202ENST00000624044 1851 ntBASIC20.01■□□□□ 0.79
CCM2LQ9NUG4 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CCM2LQ9NUG4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
CCM2LQ9NUG4 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20■□□□□ 0.79
CCM2LQ9NUG4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
CCM2LQ9NUG4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 SRD5A1P1-201ENST00000442297 786 ntBASIC20■□□□□ 0.79
CCM2LQ9NUG4 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20■□□□□ 0.79
CCM2LQ9NUG4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20■□□□□ 0.79
CCM2LQ9NUG4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCM2LQ9NUG4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 AC009102.2-201ENST00000606772 1639 ntBASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCM2LQ9NUG4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 MIR6821-201ENST00000617625 74 ntBASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 AL136967.2-201ENST00000623968 743 ntBASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCM2LQ9NUG4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 AF213884.3-201ENST00000563833 479 ntBASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 AL499627.2-201ENST00000606283 725 ntBASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 AL031602.1-201ENST00000633169 911 ntBASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 AP005212.1-201ENST00000581547 1997 ntBASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.97■□□□□ 0.79
CCM2LQ9NUG4 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 OR7E47P-201ENST00000546390 1422 ntBASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.96■□□□□ 0.79
CCM2LQ9NUG4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms