Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.8■□□□□ 0.76
ZCCHC3Q9NUD5 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC3Q9NUD5 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZCCHC3Q9NUD5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 AC005837.3-201ENST00000612163 286 ntBASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
ZCCHC3Q9NUD5 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 AL354811.1-201ENST00000610286 706 ntBASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.78■□□□□ 0.76
ZCCHC3Q9NUD5 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
ZCCHC3Q9NUD5 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZCCHC3Q9NUD5 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ZCCHC3Q9NUD5 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 NARF-205ENST00000412079 1760 ntTSL 5 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
ZCCHC3Q9NUD5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 AL358852.1-201ENST00000623174 1268 ntBASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ZCCHC3Q9NUD5 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.74■□□□□ 0.75
ZCCHC3Q9NUD5 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms