Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 TSPY9P-201ENST00000440215 945 ntBASIC20.94■□□□□ 0.94
SSU72Q9NP77 TSPY11P-201ENST00000442607 1045 ntBASIC20.94■□□□□ 0.94
SSU72Q9NP77 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 AC027702.1-201ENST00000563810 1770 ntBASIC20.94■□□□□ 0.94
SSU72Q9NP77 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SSU72Q9NP77 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SSU72Q9NP77 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 AC020907.5-201ENST00000624372 1936 ntBASIC20.93■□□□□ 0.94
SSU72Q9NP77 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SSU72Q9NP77 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.93■□□□□ 0.94
SSU72Q9NP77 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 AC121338.2-201ENST00000622535 1744 ntBASIC20.92■□□□□ 0.94
SSU72Q9NP77 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SSU72Q9NP77 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SSU72Q9NP77 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 AC239859.2-201ENST00000444165 318 ntBASIC20.91■□□□□ 0.94
SSU72Q9NP77 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SSU72Q9NP77 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.91■□□□□ 0.94
SSU72Q9NP77 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.9■□□□□ 0.94
SSU72Q9NP77 AC007225.1-201ENST00000566331 1836 ntBASIC20.9■□□□□ 0.94
SSU72Q9NP77 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 AC010525.1-201ENST00000585559 441 ntBASIC20.9■□□□□ 0.94
SSU72Q9NP77 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SSU72Q9NP77 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.9■□□□□ 0.94
SSU72Q9NP77 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SSU72Q9NP77 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
SSU72Q9NP77 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
SSU72Q9NP77 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
SSU72Q9NP77 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SSU72Q9NP77 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SSU72Q9NP77 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.89■□□□□ 0.93
SSU72Q9NP77 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.89■□□□□ 0.93
SSU72Q9NP77 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms