Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC021242.3-201ENST00000607598 1377 ntBASIC14.08□□□□□ -0.16
SND1-IT1Q9HBX3 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 BX664725.1-201ENST00000438252 379 ntBASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SND1-IT1Q9HBX3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC14.06□□□□□ -0.16
SND1-IT1Q9HBX3 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 AC012354.3-201ENST00000623734 483 ntBASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
SND1-IT1Q9HBX3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SND1-IT1Q9HBX3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
SND1-IT1Q9HBX3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms