Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 NIFKP4-201ENST00000567275 1192 ntBASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 AC026310.3-201ENST00000625186 2373 ntBASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC31.2■■■□□ 2.58
SCAF1Q9H7N4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
SCAF1Q9H7N4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 GCSHP5-201ENST00000443090 522 ntBASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 OR2I1P-207ENST00000453522 948 ntBASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
SCAF1Q9H7N4 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 MAX-217ENST00000557277 728 ntTSL 3 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC31.17■■■□□ 2.58
SCAF1Q9H7N4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 AC010331.1-201ENST00000611423 582 ntBASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC31.16■■■□□ 2.58
SCAF1Q9H7N4 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC31.15■■■□□ 2.58
SCAF1Q9H7N4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 AC073210.2-201ENST00000430369 194 ntBASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 SLC7A5P1-201ENST00000568957 537 ntBASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
SCAF1Q9H7N4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.57
SCAF1Q9H7N4 AL161729.1-201ENST00000604104 1402 ntBASIC31.13■■■□□ 2.57
SCAF1Q9H7N4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC31.13■■■□□ 2.57
SCAF1Q9H7N4 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC31.13■■■□□ 2.57
SCAF1Q9H7N4 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.13■■■□□ 2.57
SCAF1Q9H7N4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SCAF1Q9H7N4 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
SCAF1Q9H7N4 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC31.11■■■□□ 2.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms