Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 AC073314.1-201ENST00000568729 2216 ntBASIC21.93■■□□□ 1.1
DDX47Q9H0S4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 MIR3621-201ENST00000580529 85 ntBASIC21.93■■□□□ 1.1
DDX47Q9H0S4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
DDX47Q9H0S4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SRD5A1P1-201ENST00000442297 786 ntBASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 PLK5-205ENST00000642079 1969 ntBASIC21.92■■□□□ 1.1
DDX47Q9H0S4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.92■■□□□ 1.1
DDX47Q9H0S4 AC006128.1-201ENST00000624704 1661 ntBASIC21.91■■□□□ 1.1
DDX47Q9H0S4 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 AP005212.1-201ENST00000581547 1997 ntBASIC21.91■■□□□ 1.1
DDX47Q9H0S4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
DDX47Q9H0S4 AP006587.3-201ENST00000525742 1516 ntBASIC21.9■■□□□ 1.1
DDX47Q9H0S4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 AL391422.3-201ENST00000603791 2761 ntBASIC21.9■■□□□ 1.1
DDX47Q9H0S4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
DDX47Q9H0S4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
DDX47Q9H0S4 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.89■■□□□ 1.09
DDX47Q9H0S4 AC092171.4-201ENST00000609130 632 ntBASIC21.89■■□□□ 1.09
DDX47Q9H0S4 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 GABARAPL3-202ENST00000624044 1851 ntBASIC21.89■■□□□ 1.09
DDX47Q9H0S4 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
DDX47Q9H0S4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 AL512631.2-201ENST00000604634 923 ntBASIC21.88■■□□□ 1.09
DDX47Q9H0S4 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
DDX47Q9H0S4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 PCDHAC2-203ENST00000615316 3011 ntBASIC21.87■■□□□ 1.09
DDX47Q9H0S4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
DDX47Q9H0S4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms