Protein–RNA interactions for Protein: Q9H000

MKRN2, Probable E3 ubiquitin-protein ligase makorin-2, humanhuman

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN2Q9H000 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MKRN2Q9H000 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.25■□□□□ 0.99
MKRN2Q9H000 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
MKRN2Q9H000 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 RBM17P2-201ENST00000616397 1405 ntBASIC21.24■□□□□ 0.99
MKRN2Q9H000 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 AL512625.2-201ENST00000417533 625 ntBASIC21.24■□□□□ 0.99
MKRN2Q9H000 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 AC080038.3-201ENST00000623346 1952 ntBASIC21.24■□□□□ 0.99
MKRN2Q9H000 AC092053.2-201ENST00000640557 1818 ntBASIC21.24■□□□□ 0.99
MKRN2Q9H000 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
MKRN2Q9H000 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.24■□□□□ 0.99
MKRN2Q9H000 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.23■□□□□ 0.99
MKRN2Q9H000 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
MKRN2Q9H000 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.23■□□□□ 0.99
MKRN2Q9H000 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.22■□□□□ 0.99
MKRN2Q9H000 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
MKRN2Q9H000 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.21■□□□□ 0.99
MKRN2Q9H000 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.21■□□□□ 0.99
MKRN2Q9H000 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.21■□□□□ 0.99
MKRN2Q9H000 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
MKRN2Q9H000 AC026471.6-201ENST00000622954 1905 ntBASIC21.21■□□□□ 0.99
MKRN2Q9H000 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
MKRN2Q9H000 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
MKRN2Q9H000 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
MKRN2Q9H000 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.2■□□□□ 0.98
MKRN2Q9H000 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MKRN2Q9H000 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.2■□□□□ 0.98
MKRN2Q9H000 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC21.2■□□□□ 0.98
MKRN2Q9H000 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MKRN2Q9H000 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MKRN2Q9H000 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
MKRN2Q9H000 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
MKRN2Q9H000 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
MKRN2Q9H000 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.19■□□□□ 0.98
MKRN2Q9H000 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.19■□□□□ 0.98
MKRN2Q9H000 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 AL591742.1-201ENST00000604433 565 ntBASIC21.19■□□□□ 0.98
MKRN2Q9H000 AC092118.2-201ENST00000613495 667 ntBASIC21.19■□□□□ 0.98
MKRN2Q9H000 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
MKRN2Q9H000 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.19■□□□□ 0.98
MKRN2Q9H000 AC079834.2-201ENST00000609776 1949 ntBASIC21.19■□□□□ 0.98
MKRN2Q9H000 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.18■□□□□ 0.98
MKRN2Q9H000 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms