Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
NKX6-2Q9C056 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
NKX6-2Q9C056 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 AP005212.1-201ENST00000581547 1997 ntBASIC17.02■□□□□ 0.32
NKX6-2Q9C056 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 AC133552.2-201ENST00000619106 1032 ntBASIC17.02■□□□□ 0.32
NKX6-2Q9C056 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NKX6-2Q9C056 AP000974.1-201ENST00000623909 2387 ntBASIC17.02■□□□□ 0.31
NKX6-2Q9C056 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
NKX6-2Q9C056 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-2Q9C056 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NKX6-2Q9C056 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NKX6-2Q9C056 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
NKX6-2Q9C056 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 LTB4R2-202ENST00000528054 3092 ntBASIC17■□□□□ 0.31
NKX6-2Q9C056 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17■□□□□ 0.31
NKX6-2Q9C056 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
NKX6-2Q9C056 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17■□□□□ 0.31
NKX6-2Q9C056 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17■□□□□ 0.31
NKX6-2Q9C056 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
NKX6-2Q9C056 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
NKX6-2Q9C056 NEFHP1-201ENST00000412845 2629 ntBASIC17■□□□□ 0.31
NKX6-2Q9C056 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 ME2-206ENST00000638410 2289 ntTSL 5 BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 ME2-210ENST00000639255 2262 ntTSL 5 BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
NKX6-2Q9C056 AC009831.1-201ENST00000580420 1582 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms