Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 OXCT2P1-201ENST00000447263 1535 ntBASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 FP325331.1-202ENST00000623531 1380 ntBASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 AC104564.3-201ENST00000582367 638 ntBASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 GAK-223ENST00000628912 497 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
LCE3DQ9BYE3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
LCE3DQ9BYE3 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms