Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC12.49□□□□□ -0.41
LIMD2Q9BT23 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC12.49□□□□□ -0.41
LIMD2Q9BT23 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC12.49□□□□□ -0.41
LIMD2Q9BT23 AC139530.1-201ENST00000575312 1977 ntBASIC12.49□□□□□ -0.41
LIMD2Q9BT23 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LIMD2Q9BT23 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 EI24-211ENST00000534546 1544 ntTSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 AC008406.3-201ENST00000620001 1374 ntBASIC12.48□□□□□ -0.41
LIMD2Q9BT23 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 SERBP1P1-201ENST00000396021 1160 ntBASIC12.48□□□□□ -0.41
LIMD2Q9BT23 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 AC007952.6-201ENST00000573168 2673 ntBASIC12.48□□□□□ -0.41
LIMD2Q9BT23 AC003957.1-201ENST00000625108 2673 ntBASIC12.48□□□□□ -0.41
LIMD2Q9BT23 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LIMD2Q9BT23 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 LSR-203ENST00000360798 1963 ntTSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 AC080038.3-201ENST00000623346 1952 ntBASIC12.47□□□□□ -0.41
LIMD2Q9BT23 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 AP005435.1-201ENST00000529293 1178 ntBASIC12.47□□□□□ -0.41
LIMD2Q9BT23 MIR4466-201ENST00000606121 54 ntBASIC12.47□□□□□ -0.41
LIMD2Q9BT23 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
LIMD2Q9BT23 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 PTMA-205ENST00000410064 814 ntTSL 2 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
LIMD2Q9BT23 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC12.46□□□□□ -0.42
LIMD2Q9BT23 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 TERT-206ENST00000508104 2486 ntTSL 5 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
LIMD2Q9BT23 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms