Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
TRGV9Q99603 SMUG1P1-201ENST00000590640 811 ntBASIC16.42■□□□□ 0.22
TRGV9Q99603 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV9Q99603 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV9Q99603 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRGV9Q99603 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRGV9Q99603 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRGV9Q99603 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC16.42■□□□□ 0.22
TRGV9Q99603 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRGV9Q99603 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV9Q99603 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV9Q99603 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC16.41■□□□□ 0.22
TRGV9Q99603 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRGV9Q99603 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
TRGV9Q99603 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRGV9Q99603 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
TRGV9Q99603 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRGV9Q99603 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 FEM1AP1-201ENST00000431297 1995 ntBASIC16.4■□□□□ 0.22
TRGV9Q99603 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.4■□□□□ 0.22
TRGV9Q99603 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.4■□□□□ 0.22
TRGV9Q99603 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 PTMA-205ENST00000410064 814 ntTSL 2 BASIC16.4■□□□□ 0.22
TRGV9Q99603 BX842568.3-201ENST00000418104 571 ntBASIC16.4■□□□□ 0.22
TRGV9Q99603 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TRGV9Q99603 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.4■□□□□ 0.22
TRGV9Q99603 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRGV9Q99603 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC16.4■□□□□ 0.22
TRGV9Q99603 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.4■□□□□ 0.22
TRGV9Q99603 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.4■□□□□ 0.22
TRGV9Q99603 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRGV9Q99603 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRGV9Q99603 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV9Q99603 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.39■□□□□ 0.21
TRGV9Q99603 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TRGV9Q99603 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV9Q99603 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRGV9Q99603 AC131281.2-201ENST00000520478 145 ntBASIC16.39■□□□□ 0.21
TRGV9Q99603 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC16.39■□□□□ 0.21
TRGV9Q99603 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRGV9Q99603 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRGV9Q99603 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV9Q99603 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRGV9Q99603 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV9Q99603 AC006128.1-201ENST00000624704 1661 ntBASIC16.38■□□□□ 0.21
TRGV9Q99603 AC133561.4-201ENST00000566112 224 ntBASIC16.38■□□□□ 0.21
TRGV9Q99603 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.38■□□□□ 0.21
TRGV9Q99603 PALM-207ENST00000590161 2137 ntTSL 4 BASIC16.38■□□□□ 0.21
TRGV9Q99603 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.38■□□□□ 0.21
TRGV9Q99603 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.38■□□□□ 0.21
TRGV9Q99603 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRGV9Q99603 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC16.38■□□□□ 0.21
TRGV9Q99603 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV9Q99603 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRGV9Q99603 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms