Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 RASA4CP-201ENST00000424092 1398 ntBASIC15.36■□□□□ 0.05
MUC4Q99102 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
MUC4Q99102 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC15.36■□□□□ 0.05
MUC4Q99102 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 PALM-207ENST00000590161 2137 ntTSL 4 BASIC15.36■□□□□ 0.05
MUC4Q99102 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
MUC4Q99102 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.36■□□□□ 0.05
MUC4Q99102 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC15.36■□□□□ 0.05
MUC4Q99102 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 AL136162.1-201ENST00000607711 1078 ntBASIC15.36■□□□□ 0.05
MUC4Q99102 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
MUC4Q99102 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
MUC4Q99102 AP006587.3-201ENST00000525742 1516 ntBASIC15.36■□□□□ 0.05
MUC4Q99102 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
MUC4Q99102 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
MUC4Q99102 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.35■□□□□ 0.05
MUC4Q99102 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.35■□□□□ 0.05
MUC4Q99102 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC15.35■□□□□ 0.05
MUC4Q99102 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
MUC4Q99102 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.35■□□□□ 0.05
MUC4Q99102 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC15.35■□□□□ 0.05
MUC4Q99102 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
MUC4Q99102 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
MUC4Q99102 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.35■□□□□ 0.05
MUC4Q99102 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
MUC4Q99102 LINC01006-201ENST00000333319 2292 ntBASIC15.35■□□□□ 0.05
MUC4Q99102 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.34■□□□□ 0.05
MUC4Q99102 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC15.34■□□□□ 0.05
MUC4Q99102 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
MUC4Q99102 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC15.34■□□□□ 0.05
MUC4Q99102 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC15.34■□□□□ 0.05
MUC4Q99102 AICDA-202ENST00000537228 667 ntTSL 5 BASIC15.34■□□□□ 0.05
MUC4Q99102 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
MUC4Q99102 AC008764.7-201ENST00000593779 1081 ntBASIC15.34■□□□□ 0.05
MUC4Q99102 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC15.33■□□□□ 0.05
MUC4Q99102 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
MUC4Q99102 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
MUC4Q99102 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MUC4Q99102 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC15.33■□□□□ 0.04
MUC4Q99102 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.33■□□□□ 0.04
MUC4Q99102 LINC01521-201ENST00000504184 1943 ntBASIC15.33■□□□□ 0.04
MUC4Q99102 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 PARN-205ENST00000539279 1557 ntTSL 2 BASIC15.33■□□□□ 0.04
MUC4Q99102 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
MUC4Q99102 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
MUC4Q99102 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC15.32■□□□□ 0.04
MUC4Q99102 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC15.32■□□□□ 0.04
MUC4Q99102 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.32■□□□□ 0.04
MUC4Q99102 AC126544.1-201ENST00000580842 1059 ntBASIC15.32■□□□□ 0.04
MUC4Q99102 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC15.32■□□□□ 0.04
MUC4Q99102 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
MUC4Q99102 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC15.32■□□□□ 0.04
MUC4Q99102 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
MUC4Q99102 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms