Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 AL034346.1-201ENST00000568244 1277 ntBASIC17.06■□□□□ 0.32
RAB40CQ96S21 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40CQ96S21 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB40CQ96S21 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 AC006128.1-201ENST00000624704 1661 ntBASIC17.05■□□□□ 0.32
RAB40CQ96S21 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 AC087239.1-201ENST00000622671 572 ntBASIC17.05■□□□□ 0.32
RAB40CQ96S21 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.05■□□□□ 0.32
RAB40CQ96S21 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40CQ96S21 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.04■□□□□ 0.32
RAB40CQ96S21 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40CQ96S21 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RAB40CQ96S21 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.04■□□□□ 0.32
RAB40CQ96S21 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC241377.3-202ENST00000626088 1088 ntBASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC241585.3-202ENST00000628937 1088 ntBASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC245100.8-202ENST00000629247 1058 ntBASIC17.04■□□□□ 0.32
RAB40CQ96S21 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RAB40CQ96S21 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC007952.6-201ENST00000573168 2673 ntBASIC17.04■□□□□ 0.32
RAB40CQ96S21 AC003957.1-201ENST00000625108 2673 ntBASIC17.04■□□□□ 0.32
RAB40CQ96S21 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 AC133637.1-201ENST00000624115 1537 ntBASIC17.03■□□□□ 0.32
RAB40CQ96S21 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 KRT125P-201ENST00000546827 989 ntBASIC17.03■□□□□ 0.32
RAB40CQ96S21 Z92544.1-202ENST00000571933 1220 ntBASIC17.03■□□□□ 0.32
RAB40CQ96S21 AL451085.2-201ENST00000605085 799 ntBASIC17.03■□□□□ 0.32
RAB40CQ96S21 AC092028.1-203ENST00000608262 953 ntBASIC17.03■□□□□ 0.32
RAB40CQ96S21 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RAB40CQ96S21 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RAB40CQ96S21 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RAB40CQ96S21 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40CQ96S21 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 CD72-202ENST00000378430 585 ntTSL 3 BASIC17.02■□□□□ 0.32
RAB40CQ96S21 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.02■□□□□ 0.32
RAB40CQ96S21 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RAB40CQ96S21 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.02■□□□□ 0.32
RAB40CQ96S21 AC009299.2-201ENST00000482477 511 ntBASIC17.02■□□□□ 0.32
RAB40CQ96S21 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms