Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H4Q96RI1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NR1H4Q96RI1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 AIRN-201ENST00000601203 4374 ntBASIC19.84■□□□□ 0.77
NR1H4Q96RI1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NR1H4Q96RI1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 AL592295.1-201ENST00000400984 884 ntBASIC19.83■□□□□ 0.77
NR1H4Q96RI1 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.83■□□□□ 0.77
NR1H4Q96RI1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.83■□□□□ 0.76
NR1H4Q96RI1 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NR1H4Q96RI1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.83■□□□□ 0.76
NR1H4Q96RI1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NR1H4Q96RI1 C17orf82-201ENST00000623772 1530 ntBASIC19.81■□□□□ 0.76
NR1H4Q96RI1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 TNXA-203ENST00000507684 2038 ntBASIC19.81■□□□□ 0.76
NR1H4Q96RI1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NR1H4Q96RI1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NR1H4Q96RI1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 AC006128.1-201ENST00000624704 1661 ntBASIC19.79■□□□□ 0.76
NR1H4Q96RI1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NR1H4Q96RI1 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms