Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
DUX3Q96PT4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
DUX3Q96PT4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
DUX3Q96PT4 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 AC010141.2-201ENST00000452426 721 ntBASIC16.36■□□□□ 0.21
DUX3Q96PT4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 MYCNOS-205ENST00000641950 531 ntBASIC16.36■□□□□ 0.21
DUX3Q96PT4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
DUX3Q96PT4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
DUX3Q96PT4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.35■□□□□ 0.21
DUX3Q96PT4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SLC7A5P2-201ENST00000553010 536 ntBASIC16.35■□□□□ 0.21
DUX3Q96PT4 AC138907.5-202ENST00000569484 235 ntBASIC16.35■□□□□ 0.21
DUX3Q96PT4 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
DUX3Q96PT4 AC026471.6-201ENST00000622954 1905 ntBASIC16.35■□□□□ 0.21
DUX3Q96PT4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.35■□□□□ 0.21
DUX3Q96PT4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
DUX3Q96PT4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
DUX3Q96PT4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
DUX3Q96PT4 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.34■□□□□ 0.21
DUX3Q96PT4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
DUX3Q96PT4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
DUX3Q96PT4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DUX3Q96PT4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DUX3Q96PT4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.33■□□□□ 0.21
DUX3Q96PT4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
DUX3Q96PT4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DUX3Q96PT4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
DUX3Q96PT4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 DUX4L16-201ENST00000555130 1264 ntBASIC16.33■□□□□ 0.2
DUX3Q96PT4 EEF1DP3-203ENST00000566025 782 ntBASIC16.33■□□□□ 0.2
DUX3Q96PT4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16.33■□□□□ 0.2
DUX3Q96PT4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
DUX3Q96PT4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms