Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
COL21A1Q96P44 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
COL21A1Q96P44 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.86■□□□□ 0.77
COL21A1Q96P44 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.86■□□□□ 0.77
COL21A1Q96P44 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.86■□□□□ 0.77
COL21A1Q96P44 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COL21A1Q96P44 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
COL21A1Q96P44 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COL21A1Q96P44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.86■□□□□ 0.77
COL21A1Q96P44 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
COL21A1Q96P44 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COL21A1Q96P44 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 AL034346.1-201ENST00000568244 1277 ntBASIC19.84■□□□□ 0.77
COL21A1Q96P44 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 MIR6084-201ENST00000622012 110 ntBASIC19.84■□□□□ 0.77
COL21A1Q96P44 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
COL21A1Q96P44 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 AF106564.1-201ENST00000607058 2553 ntBASIC19.84■□□□□ 0.77
COL21A1Q96P44 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.84■□□□□ 0.77
COL21A1Q96P44 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.83■□□□□ 0.77
COL21A1Q96P44 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL21A1Q96P44 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 BX005040.4-201ENST00000637145 1518 ntBASIC19.83■□□□□ 0.77
COL21A1Q96P44 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.83■□□□□ 0.77
COL21A1Q96P44 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COL21A1Q96P44 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.83■□□□□ 0.77
COL21A1Q96P44 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COL21A1Q96P44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.83■□□□□ 0.76
COL21A1Q96P44 AP004607.7-201ENST00000527152 1677 ntBASIC19.83■□□□□ 0.76
COL21A1Q96P44 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.83■□□□□ 0.76
COL21A1Q96P44 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COL21A1Q96P44 FEM1AP4-201ENST00000443167 1987 ntBASIC19.83■□□□□ 0.76
COL21A1Q96P44 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.83■□□□□ 0.76
COL21A1Q96P44 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.83■□□□□ 0.76
COL21A1Q96P44 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.82■□□□□ 0.76
COL21A1Q96P44 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL21A1Q96P44 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
COL21A1Q96P44 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
COL21A1Q96P44 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.82■□□□□ 0.76
COL21A1Q96P44 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
COL21A1Q96P44 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms