Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 AC139530.1-201ENST00000575312 1977 ntBASIC17.15■□□□□ 0.34
ZNF48Q96MX3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
ZNF48Q96MX3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 AC137767.1-201ENST00000602918 1920 ntBASIC17.14■□□□□ 0.33
ZNF48Q96MX3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 TSPY20P-201ENST00000450910 630 ntBASIC17.14■□□□□ 0.33
ZNF48Q96MX3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 AC053503.5-201ENST00000601508 636 ntBASIC17.14■□□□□ 0.33
ZNF48Q96MX3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.14■□□□□ 0.33
ZNF48Q96MX3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 AC092053.2-201ENST00000640557 1818 ntBASIC17.13■□□□□ 0.33
ZNF48Q96MX3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 AC133552.2-202ENST00000575694 574 ntBASIC17.13■□□□□ 0.33
ZNF48Q96MX3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ZNF48Q96MX3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 TERF1P5-201ENST00000477545 1207 ntBASIC17.12■□□□□ 0.33
ZNF48Q96MX3 AC098934.4-201ENST00000564127 592 ntBASIC17.12■□□□□ 0.33
ZNF48Q96MX3 SLC7A5P1-201ENST00000568957 537 ntBASIC17.12■□□□□ 0.33
ZNF48Q96MX3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 TMEM191A-211ENST00000637163 1067 ntBASIC17.12■□□□□ 0.33
ZNF48Q96MX3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ZNF48Q96MX3 CLDN5-201ENST00000403084 2357 ntBASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AC069152.1-201ENST00000438030 544 ntBASIC17.11■□□□□ 0.33
ZNF48Q96MX3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AC013268.1-206ENST00000638368 961 ntBASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AC112229.1-201ENST00000639295 961 ntBASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ZNF48Q96MX3 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
ZNF48Q96MX3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF48Q96MX3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.1■□□□□ 0.33
ZNF48Q96MX3 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
ZNF48Q96MX3 CYP2T1P-201ENST00000432607 1285 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms