Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE2Q96FN4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.22■□□□□ 0.51
CPNE2Q96FN4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 AC005229.4-201ENST00000610085 2198 ntBASIC18.21■□□□□ 0.51
CPNE2Q96FN4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 SLC47A1P1-202ENST00000449666 945 ntBASIC18.21■□□□□ 0.51
CPNE2Q96FN4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 AC026471.6-201ENST00000622954 1905 ntBASIC18.21■□□□□ 0.51
CPNE2Q96FN4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CPNE2Q96FN4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
CPNE2Q96FN4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.21■□□□□ 0.5
CPNE2Q96FN4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CPNE2Q96FN4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 AIRN-201ENST00000601203 4374 ntBASIC18.19■□□□□ 0.5
CPNE2Q96FN4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
CPNE2Q96FN4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CPNE2Q96FN4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms