Protein–RNA interactions for Protein: Q96AJ9

VTI1A, Vesicle transport through interaction with t-SNAREs homolog 1A, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1AQ96AJ9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 AL034346.1-201ENST00000568244 1277 ntBASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 AC069236.1-201ENST00000604339 616 ntBASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VTI1AQ96AJ9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 OR10C1-204ENST00000622521 1039 ntBASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
VTI1AQ96AJ9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 AC016405.3-201ENST00000607710 860 ntBASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
VTI1AQ96AJ9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 LINC00526-201ENST00000581067 1875 ntBASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 AC053503.5-201ENST00000601508 636 ntBASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 AC120498.10-201ENST00000621827 505 ntBASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
VTI1AQ96AJ9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.77■■□□□ 1.39
VTI1AQ96AJ9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 BX276092.2-201ENST00000417668 665 ntBASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 AC093787.1-201ENST00000450396 207 ntBASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 EEF1DP3-203ENST00000566025 782 ntBASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 MARS-234ENST00000630571 216 ntTSL 5 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 MARS-235ENST00000630803 183 ntTSL 3 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
VTI1AQ96AJ9 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
VTI1AQ96AJ9 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
VTI1AQ96AJ9 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms