Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 AC021242.3-201ENST00000607598 1377 ntBASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CKAP2Q8WWK9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
CKAP2Q8WWK9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 AC103834.1-201ENST00000520383 144 ntBASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 AC103724.3-201ENST00000564481 992 ntBASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CKAP2Q8WWK9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.94■□□□□ 0.94
CKAP2Q8WWK9 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 AL033527.3-201ENST00000566366 1196 ntBASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 AC020907.5-201ENST00000624372 1936 ntBASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CKAP2Q8WWK9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.92■□□□□ 0.94
CKAP2Q8WWK9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 TSPY13P-201ENST00000338964 914 ntBASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 AL451085.2-201ENST00000605085 799 ntBASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.91■□□□□ 0.94
CKAP2Q8WWK9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.9■□□□□ 0.94
CKAP2Q8WWK9 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms