Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 MIR4466-201ENST00000606121 54 ntBASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 PLK5-205ENST00000642079 1969 ntBASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC44A1Q8WWI5 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 GABARAPL3-202ENST00000624044 1851 ntBASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 AP005212.1-201ENST00000581547 1997 ntBASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC44A1Q8WWI5 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SLC44A1Q8WWI5 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 SMUG1P1-201ENST00000590640 811 ntBASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLC44A1Q8WWI5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 AC073314.1-201ENST00000568729 2216 ntBASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLC44A1Q8WWI5 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.08■□□□□ 0.97
SLC44A1Q8WWI5 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC44A1Q8WWI5 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLC44A1Q8WWI5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLC44A1Q8WWI5 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.96
SLC44A1Q8WWI5 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
SLC44A1Q8WWI5 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A1Q8WWI5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SLC44A1Q8WWI5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A1Q8WWI5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SLC44A1Q8WWI5 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms