Protein–RNA interactions for Protein: Q8TD47

RPS4Y2, 40S ribosomal protein S4, Y isoform 2, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y2Q8TD47 PLK5-205ENST00000642079 1969 ntBASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 AL512631.2-201ENST00000604634 923 ntBASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 AC073314.1-201ENST00000568729 2216 ntBASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RPS4Y2Q8TD47 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.46■□□□□ 0.54
RPS4Y2Q8TD47 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 AL138724.1-201ENST00000606771 1088 ntBASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RPS4Y2Q8TD47 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 SRR-208ENST00000576848 588 ntTSL 4 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.44■□□□□ 0.54
RPS4Y2Q8TD47 AC008406.3-201ENST00000620001 1374 ntBASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 SRD5A1P1-201ENST00000442297 786 ntBASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RPS4Y2Q8TD47 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RPS4Y2Q8TD47 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms