Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SHKBP1Q8TBC3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SHKBP1Q8TBC3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 AC068338.2-201ENST00000563278 1430 ntBASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 KRT18P6-201ENST00000555540 1265 ntBASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SHKBP1Q8TBC3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 CYP2T1P-201ENST00000432607 1285 ntBASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 AC098934.4-201ENST00000564127 592 ntBASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.16■■□□□ 1.14
SHKBP1Q8TBC3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 AC069152.1-201ENST00000438030 544 ntBASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.15■■□□□ 1.14
SHKBP1Q8TBC3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 AC007322.4-201ENST00000509611 723 ntBASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.14■■□□□ 1.13
SHKBP1Q8TBC3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 AC007375.3-201ENST00000600936 2314 ntBASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 TSPY20P-201ENST00000450910 630 ntBASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SHKBP1Q8TBC3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
SHKBP1Q8TBC3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms