Protein–RNA interactions for Protein: Q8NG27

PJA1, E3 ubiquitin-protein ligase Praja-1, humanhuman

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PJA1Q8NG27 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.67■■□□□ 1.06
PJA1Q8NG27 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.67■■□□□ 1.06
PJA1Q8NG27 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PJA1Q8NG27 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PJA1Q8NG27 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 C9orf163-202ENST00000624034 2573 ntBASIC21.66■■□□□ 1.06
PJA1Q8NG27 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 AC026366.1-201ENST00000488803 879 ntBASIC21.66■■□□□ 1.06
PJA1Q8NG27 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.66■■□□□ 1.06
PJA1Q8NG27 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PJA1Q8NG27 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PJA1Q8NG27 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PJA1Q8NG27 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PJA1Q8NG27 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PJA1Q8NG27 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.65■■□□□ 1.06
PJA1Q8NG27 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PJA1Q8NG27 AC010980.2-201ENST00000587099 1412 ntBASIC21.64■■□□□ 1.06
PJA1Q8NG27 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PJA1Q8NG27 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.64■■□□□ 1.06
PJA1Q8NG27 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.64■■□□□ 1.06
PJA1Q8NG27 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PJA1Q8NG27 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
PJA1Q8NG27 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.64■■□□□ 1.05
PJA1Q8NG27 UNC93B5-201ENST00000530315 699 ntBASIC21.64■■□□□ 1.05
PJA1Q8NG27 AL034346.1-201ENST00000568244 1277 ntBASIC21.64■■□□□ 1.05
PJA1Q8NG27 AC120498.10-201ENST00000621827 505 ntBASIC21.64■■□□□ 1.05
PJA1Q8NG27 AC073648.6-201ENST00000641589 218 ntBASIC21.64■■□□□ 1.05
PJA1Q8NG27 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PJA1Q8NG27 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 AC008550.1-201ENST00000511500 884 ntBASIC21.63■■□□□ 1.05
PJA1Q8NG27 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.63■■□□□ 1.05
PJA1Q8NG27 AL162412.1-201ENST00000567129 965 ntBASIC21.63■■□□□ 1.05
PJA1Q8NG27 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PJA1Q8NG27 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 AP003097.1-201ENST00000530657 1135 ntBASIC21.62■■□□□ 1.05
PJA1Q8NG27 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.62■■□□□ 1.05
PJA1Q8NG27 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PJA1Q8NG27 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms