Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RTL9Q8NET4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTL9Q8NET4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTL9Q8NET4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 MIR4758-201ENST00000577688 71 ntBASIC26.1■■□□□ 1.77
RTL9Q8NET4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 AL591742.1-201ENST00000604433 565 ntBASIC26.1■■□□□ 1.77
RTL9Q8NET4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.1■■□□□ 1.77
RTL9Q8NET4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RTL9Q8NET4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTL9Q8NET4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.09■■□□□ 1.77
RTL9Q8NET4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC26.09■■□□□ 1.77
RTL9Q8NET4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC26.09■■□□□ 1.77
RTL9Q8NET4 AC008687.6-201ENST00000596318 630 ntBASIC26.09■■□□□ 1.77
RTL9Q8NET4 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.09■■□□□ 1.77
RTL9Q8NET4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.09■■□□□ 1.77
RTL9Q8NET4 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RTL9Q8NET4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
RTL9Q8NET4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 AC008694.1-202ENST00000636953 945 ntBASIC26.08■■□□□ 1.77
RTL9Q8NET4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTL9Q8NET4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTL9Q8NET4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
RTL9Q8NET4 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.08■■□□□ 1.77
RTL9Q8NET4 PPP1R14BP2-201ENST00000426284 444 ntBASIC26.07■■□□□ 1.76
RTL9Q8NET4 FAM201B-201ENST00000458407 597 ntBASIC26.07■■□□□ 1.76
RTL9Q8NET4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
RTL9Q8NET4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 RARRES2P4-201ENST00000514074 484 ntBASIC26.07■■□□□ 1.76
RTL9Q8NET4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.07■■□□□ 1.76
RTL9Q8NET4 FAM99A-202ENST00000538190 1989 ntBASIC26.06■■□□□ 1.76
RTL9Q8NET4 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTL9Q8NET4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC26.06■■□□□ 1.76
RTL9Q8NET4 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTL9Q8NET4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
RTL9Q8NET4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTL9Q8NET4 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.06■■□□□ 1.76
RTL9Q8NET4 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
RTL9Q8NET4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTL9Q8NET4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RTL9Q8NET4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RTL9Q8NET4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.05■■□□□ 1.76
RTL9Q8NET4 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTL9Q8NET4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RTL9Q8NET4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RTL9Q8NET4 C9orf163-202ENST00000624034 2573 ntBASIC26.04■■□□□ 1.76
RTL9Q8NET4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC26.04■■□□□ 1.76
RTL9Q8NET4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.03■■□□□ 1.76
RTL9Q8NET4 PBX1-209ENST00000485769 834 ntTSL 2 BASIC26.03■■□□□ 1.76
RTL9Q8NET4 AC093827.2-201ENST00000512654 315 ntBASIC26.03■■□□□ 1.76
RTL9Q8NET4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.03■■□□□ 1.76
RTL9Q8NET4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 MYC-209ENST00000641252 345 ntBASIC26.03■■□□□ 1.76
RTL9Q8NET4 AC010542.4-201ENST00000563151 1910 ntBASIC26.03■■□□□ 1.76
RTL9Q8NET4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 AC010980.2-201ENST00000587099 1412 ntBASIC26.03■■□□□ 1.76
RTL9Q8NET4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTL9Q8NET4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.03■■□□□ 1.76
RTL9Q8NET4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC26.02■■□□□ 1.76
RTL9Q8NET4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTL9Q8NET4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.02■■□□□ 1.76
RTL9Q8NET4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTL9Q8NET4 AC091799.1-201ENST00000422823 811 ntBASIC26.02■■□□□ 1.76
RTL9Q8NET4 POU5F1P3-201ENST00000428824 1078 ntBASIC26.02■■□□□ 1.76
RTL9Q8NET4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms