Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
DNAAF1Q8NEP3 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 AC010141.3-201ENST00000456659 717 ntBASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
DNAAF1Q8NEP3 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 SYT6-210ENST00000641643 1587 ntBASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.46■□□□□ 0.55
DNAAF1Q8NEP3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
DNAAF1Q8NEP3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 AC011298.3-201ENST00000615796 283 ntBASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
DNAAF1Q8NEP3 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 SERBP1P1-201ENST00000396021 1160 ntBASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 MIR4466-201ENST00000606121 54 ntBASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 AC136469.2-201ENST00000623944 1028 ntBASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DNAAF1Q8NEP3 OXCT2P1-201ENST00000447263 1535 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms