Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF439Q8NDP4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 RALB-208ENST00000631312 311 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF439Q8NDP4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 AC009237.3-201ENST00000393279 1427 ntBASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF439Q8NDP4 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 AC055733.4-201ENST00000638462 1354 ntBASIC17.4■□□□□ 0.38
ZNF439Q8NDP4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF439Q8NDP4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ZNF439Q8NDP4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ZNF439Q8NDP4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.39■□□□□ 0.37
ZNF439Q8NDP4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 BX005040.4-201ENST00000637145 1518 ntBASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 AC012414.1-201ENST00000556676 535 ntBASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 AC142381.2-201ENST00000566120 298 ntBASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 AC005837.3-201ENST00000612163 286 ntBASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 AC005224.4-201ENST00000583262 1652 ntBASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ZNF439Q8NDP4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
ZNF439Q8NDP4 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms